free web service for parallel image-based plant phenotyping — deploy to clusters with a click
bind CyVerse datasets to reproducible container workflows, no programming experience required
add a plantit.yaml
file to a public repository to integrate a workflow, then configure and run in the browser
supersedes Digital Imaging of Root Traits — supports original DIRT2D, DIRT3D (Liu et al 2021) and more
flexible, but built for phenomics — a different tool (e.g., CoGe or easyGWAS) may be a better fit for genomics workflows
contributions, bug reports, suggestions, and feature requests are welcome on GitHub or get in touch regarding a use case
note: platform developers can't guarantee correctness or validity of hosted workflows —
questions should be raised with workflow authors and results double-checked for errors!